[ { "@graph" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU", "@type" : [ "http://www.nanopub.org/nschema#Nanopublication" ], "http://www.nanopub.org/nschema#hasAssertion" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#assertion" } ], "http://www.nanopub.org/nschema#hasProvenance" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#pubinfo" } ] } ], "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#Head" }, { "@graph" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#assertion", "@type" : [ "https://w3id.org/np/o/ntemplate/AssertionTemplate" ], "http://purl.org/dc/terms/description" : [ { "@value" : "

Such a nanopublication expresses an association between two organism instances (subject and object), for example expressing that one subject individual ate the object individual.

\r\n\r\n

For expressing interactions or more general knowledge between classes of organisms (taxa), please use the alternative template \"Associations between taxa\".

" } ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Expressing an association between two organisms" } ], "https://w3id.org/np/o/ntemplate/hasDefaultProvenance" : [ { "@id" : "http://purl.org/np/RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s" } ], "https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern" : [ { "@value" : "Organism of ${subjtaxonname} - ${relation} - organism of ${objtaxonname}" } ], "https://w3id.org/np/o/ntemplate/hasStatement" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st00" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st05" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st09" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st10" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st11" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st12" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st20" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st25" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st30" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st39" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st40" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st41" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st42" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st50" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st55" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st60" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st81" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st82" }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st90" } ], "https://w3id.org/np/o/ntemplate/hasTag" : [ { "@value" : "Biodiversity" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#association", "@type" : [ "https://w3id.org/np/o/ntemplate/IntroducedResource", "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "this association" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#comment", "@type" : [ "https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "short explanation related to the above statement" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#coordinates", "@type" : [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "lat/long coordinates in format like '+47.37+8.54' or with altitude '+47.37+8.54+410.5'" } ], "https://w3id.org/np/o/ntemplate/hasRegex" : [ { "@value" : "[+-][0-9]+(\\.[0-9]+)?[+-][0-9]+(\\.[0-9]+)?([+-][0-9]+(\\.[0-9]+)?)?" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#obj", "@type" : [ "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the object organism" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objAlt", "@type" : [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "any existing URI identifier of organism (e.g. of digital collection specimen or observation in nature)" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objlifecyclestage", "@type" : [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "select the life cycle stage of the object organism; leave blank if unknown" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom" : [ { "@id" : "http://purl.org/np/RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objoccurrence", "@type" : [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "occurrence URI from GBIF (https://www.gbif.org/occurrence/...) or iDigBio, BOLD, PlutoF, etc." } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objtaxon", "@type" : [ "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the object taxon concept" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objtaxondef", "@type" : [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "taxon concept reference (https://doi.org/... or https://treatment.plazi.org/id/...)" } ], "https://w3id.org/np/o/ntemplate/hasRegex" : [ { "@value" : "(https://doi.org/|https://treatment.plazi.org/id/).+" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objtaxonname", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "search and select from list (if not found, paste identifying URI from IPNI, MycoBank, Index Fungorum, or Zoobank)" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://vodex.petapico.org/nidx/query?rows=100&q=label:" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#relation", "@type" : [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the relation between the two organisms" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom" : [ { "@id" : "http://purl.org/np/RAodaWZBY-yDEtl9reYazBfI-YVD5L4zPh8RrVFS0kbEo" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st00", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/biolink/vocab/OrganismToOrganismAssociation" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#association" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st05", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#relation" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/predicate" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#association" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st09", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subj" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/subject" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#association" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st10", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subjtaxon" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subj" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st11", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subjtaxonname" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonName" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subjtaxon" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st12", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subjtaxondef" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subjtaxon" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st20", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subjlifecyclestage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasCycleStage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subj" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st25", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subjoccurrence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasOccurrence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subj" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st30", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subjAlt" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/2002/07/owl#sameAs" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#subj" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st39", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#obj" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/object" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#association" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st40", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objtaxon" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#obj" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st41", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objtaxonname" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonName" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objtaxon" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st42", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objtaxondef" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objtaxon" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st50", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objlifecyclestage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasCycleStage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#obj" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st55", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objoccurrence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasOccurrence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#obj" } ] }, { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#st60", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RA79AZMFRk_s41PdOHWvH_DIwCHWCb6SN-wYuBuoihkrU#objAlt" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : 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