[ { "@graph" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY", "@type" : [ "http://www.nanopub.org/nschema#Nanopublication" ], "http://www.nanopub.org/nschema#hasAssertion" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#assertion" } ], "http://www.nanopub.org/nschema#hasProvenance" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#pubinfo" } ] } ], "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#Head" }, { "@graph" : [ { "@id" : "http://purl.obolibrary.org/obo/RO_0001019", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "contains" } ] }, { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is an" } ] }, { "@id" : "https://w3id.org/biolink/vocab/object", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the chemical" } ] }, { "@id" : "https://w3id.org/biolink/vocab/predicate", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the relation (between taxon and chemical)" } ] }, { "@id" : "https://w3id.org/biolink/vocab/subject", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the organism taxon" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#assertion", "@type" : [ "https://w3id.org/np/o/ntemplate/AssertionTemplate", "https://w3id.org/np/o/ntemplate/UnlistedTemplate" ], "http://purl.org/dc/terms/description" : [ { "@value" : "Such a nanopublication expresses an association between an organism taxon (e.g. a species) and a chemical." } ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Expressing an association between an organism taxon and a chemical" } ], "https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern" : [ { "@value" : "${taxon} ${relation} ${chemical}" } ], "https://w3id.org/np/o/ntemplate/hasStatement" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#st0" }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#st1" }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#st2" }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#st3" } ], "https://w3id.org/np/o/ntemplate/hasTag" : [ { "@value" : "Biodiversity" } ], "https://w3id.org/np/o/ntemplate/hasTargetNanopubType" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/BiodivNanopub" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#association", "@type" : [ "https://w3id.org/np/o/ntemplate/IntroducedResource", "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "this association" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#chemical", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the chemical to be associated with the taxon" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#relation", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the type of relation between the taxon and the chemical" } ], "https://w3id.org/np/o/ntemplate/possibleValue" : [ { "@id" : "http://purl.obolibrary.org/obo/RO_0001019" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://www.ebi.ac.uk/ols/api/select?ontology=ro&fieldList=iri,label,description&q=" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#st0", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3ihttps://w3id.org/kpxl/biodiv/terms/OrganismTaxonToChemicalAssociation" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#association" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#st1", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#taxon" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/subject" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#association" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#st2", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#relation" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/predicate" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#association" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#st3", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#chemical" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/object" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#association" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#taxon", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the organism taxon, e.g. a species" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" } ] }, { "@id" : "https://w3ihttps://w3id.org/kpxl/biodiv/terms/OrganismTaxonToChemicalAssociation", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "organism taxon to chemical association" } ] } ], "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#assertion" }, { "@graph" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#assertion", "http://www.w3.org/ns/prov#wasAttributedTo" : [ { "@id" : "https://orcid.org/0000-0002-1267-0234" } ] } ], "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#provenance" }, { "@graph" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY", "http://purl.org/dc/terms/created" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#dateTime", "@value" : "2024-02-06T16:11:26.816Z" } ], "http://purl.org/dc/terms/creator" : [ { "@id" : "https://orcid.org/0000-0002-1267-0234" }, { "@id" : "https://orcid.org/0000-0003-3389-2191" } ], "http://purl.org/dc/terms/license" : [ { "@id" : "https://creativecommons.org/licenses/by/4.0/" } ], "http://purl.org/nanopub/x/supersedes" : [ { "@id" : "https://w3id.org/np/RAYPTZVeBhqbabhNwh9aB0AoK_bz_Uk5Z3bEh-8gs0QiU" } ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Template: Expressing an association between an organism taxon and a chemical" } ], "http://www.w3.org/ns/prov#wasDerivedFrom" : [ { "@id" : "https://w3id.org/np/RAxvh4t8yoViwe1P-Qbole8o-ZIlURCj7uvDND9mIBr6M" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate" : [ { "@id" : "http://purl.org/np/RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate" : [ { "@id" : "http://purl.org/np/RA2vCBXZf-icEcVRGhulJXugTGxpsV5yVr9yqCI1bQh4A" }, { "@id" : "http://purl.org/np/RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM" }, { "@id" : "http://purl.org/np/RABngHbKpoJ3U9Nebc8mX_KUdv_vXw28EejqAyQya5zVA" }, { "@id" : "http://purl.org/np/RAh1gm83JiG5M6kDxXhaYT1l49nCzyrckMvTzcPn-iv90" }, { "@id" : "http://purl.org/np/RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate" : [ { "@id" : "http://purl.org/np/RAJwu5sVubRqXY4t2gkSoGxWkMyZqnpkGTCPiTlmvi4so" } ] }, { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#sig", "http://purl.org/nanopub/x/hasAlgorithm" : [ { "@value" : "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey" : [ { "@value" : "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD4Wj537OijfOWVtsHMznuXKISqBhtGDQZfdO6pbb4hg9EHMcUFGTLbWaPrP783PHv8HMAAPjvEkHLaOHMIknqhaIa5236lfBO3r+ljVdYBElBcLvROmwG+ZGtmPNZf7lMhI15xf5TfoaSa84AFRd5J2EXekK6PhaFQhRm1IpSYtwIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature" : [ { "@value" : "bre6T6+1qQVyVy9LBzoESjjq+RUkvIly9azxExVXG3u1sXjZCjIHZsT8LJg/uz+eskk0ubicR5YuBEHoAbGt/cwB2wrb2TcbmepLjrZVTZv+6VVAl5BZ0BdG5QTPloSDFrNgG17HBrxT4fAMeSEpo17VUWzaS1zVmMl0qYY6NHA=" } ], "http://purl.org/nanopub/x/hasSignatureTarget" : [ { "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY" } ] } ], "@id" : "https://w3id.org/np/RAcFqwDaMqxdQjp-oROuWc17R07kgzuEsbrkuT2H1UcMY#pubinfo" } ]