. . . . "

This nanopublication makes a statement that in the context of a thing of a certain type (e.g. a mouse), another thing of a certain type (e.g. a gene) tends to have a relation (such as causing) to another thing of a certain type (e.g. a disease) in the same context.

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Note that the context is not a reference to a general topic or field. It denotes the class for the context in which the relations happen. If each relation is happening in a human, for example, such as a certain condition leading to a certain symptom, then the context class should be 'human'.

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The technical background of the super-pattern can be found in this publication.

" . . "Expressing a general claim with a super-pattern" . . . . . . . . "Claims" . . "URI of the context class" . . "http://purl.org/nanopub/api/find_signed_things?type=http%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23Class&searchterm=" . "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" . . "informal label or text for the whole superpattern instance" . . "URI of the object class" . "http://purl.org/nanopub/api/find_signed_things?type=http%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23Class&searchterm=" . "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" . . "URI of the qualifier" . . . . . . . . . . . . . . . . . . . . . . "URI of the relation type" . . . . . . . . . . . . . . . . . . . . . . . . . "SPI: - this super-pattern instance" . . . . . . . . . . . . . . . . . . . . . . . "URI of the subject class" . "http://purl.org/nanopub/api/find_signed_things?type=http%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23Class&searchterm=" . "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" . "This is a - links a thing (left) to a class it belongs (right)" . "Informally, it can be shown as - links a formal identifier (left) to a human-readable name (right)" . "super-pattern instance - a statement that conforms to the super-pattern" . "universal context (i.e. no context restriction) - The universal context is used in a super-pattern when the subject and object instances of a super-pattern statement happen outside of any obvious context entities (such as the context of \"organism\" in the case of genes affecting diseases)" . "affects - the subject instance positively or negatively affects the intensity or frequency of the activity instance of the object" . "always - true in 100% of cases" . "can always - can be made true in 100% cases" . "can frequently not - can be made true in at most 90% of cases" . "can frequently - can be made true in at least 10% of cases" . "can generally not - can be made true in at most 10% of cases" . "can generally - can be made true in at least 90% of cases" . "can mostly not - can be made true in at most 50% of cases" . "can mostly - can be made true in at least 50% of cases" . "can never - can be made true in 0% of cases" . "can sometimes not - can be made true in at most 99.9% of cases" . "can sometimes - can be made true in at least 0.1% of cases" . "causes - the subject instance causes the existence of the object instance" . "contributes to - the subject instance positively affects the intensity or frequency of the activity instance of the object" . "co-occurs with - the subject instance is close to the object instance in terms of space and time" . "decreases - the subject instance causes the value of the object instance to decrease" . "enables - the subject instance causes the activity instance of the object to happen" . "follows - the object instance came into existence before the subject instance" . "frequently not - true in at most 90% of cases" . "frequently - true in at least 10% of cases" . "generally not - true in at most 10% of cases" . "generally - true in at least 90% of the cases" . "In the context of all things of type - specifies the context class (right) for the given super-pattern instance (left)" . "has different value from - the quantifiable subject instance has a value that is different from the quantifiable object instance" . "has larger value than - the quantifiable subject instance has a larger value than the quantifiable object instance" . "... to things of type - specifies the object class (right) for the given super-pattern instance (left)" . "... (qualifier) - specifies the qualifier (right) for the given super-pattern statement (left)" . "... have a relation of type - specifies the relation type (right) for the given super-pattern statement (left)" . "has same value as - the quantifiable subject instance has the same value as the quantifiable object instance" . "has similar value as - the quantifiable subject instance has a similar value as the quantifiable object instance" . "has smaller value than - the quantifiable subject instance has a smaller value than the quantifiable object instance" . "... things of type - specifies the subject class (right) for the given super-pattern instance (left)" . "includes - the subject instance spatiotemporally includes the object instance" . "increases - the subject instance causes the value of the object instance to increase" . "inhibits - the subject instance negatively affects the intensity or frequency of the activity instance of the object" . "is caused by - the existence of the subject instance is caused by the object instance" . "is followed by - the subject instance comes into existence before the object instance" . "is included in - the object instance spatiotemporally includes the subject instance" . "is necessary and sufficient for - the subject instance causes the existence of the object instance, which would not come to exist if the subject did not exist" . "is same as - the subject instance and the object instance are the same individual" . "mostly not - true in at most 50% of cases" . "mostly - true in at least 50% of cases" . "never - true in 0% of cases" . "prevents - the subject instance causes the activity instance of the object not to happen" . "requires - the subject instance would not come to exist if the object instance did not exist" . "sometimes not - true in at most 99.9% of cases" . "sometimes - true in at least 0.1% of cases" . . "RSA" . "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCwUtewGCpT5vIfXYE1bmf/Uqu1ojqnWdYxv+ySO80ul8Gu7m8KoyPAwuvaPj0lvPtHrg000qMmkxzKhYknEjq8v7EerxZNYp5B3/3+5ZpuWOYAs78UnQVjbHSmDdmryr4D4VvvNIiUmd0yxci47dTFUj4DvfHnGd6hVe5+goqdcwIDAQAB" . "m3lW7Rlj/SypoBLJpfMPRMDH8D7J8YsXsYHMpiDtl66cRlz8OtMAqpPkCA35g2+2N8fEuXkvBmNk3ySFp3sn3+vXuaqsMJfwrZGtHMPnR/j/chkTT4kjJYqnTZoYkyL4CaEiIpzwSk779HpLe/fGxmC/3f1MWtR1Ti3RYLNqfyM=" . . "2023-03-01T09:28:08.621+01:00"^^ . . . . . . .