@prefix dc: <
http://purl.org/dc/terms/
> .
@prefix this: <
http://www.tkuhn.ch/bel2nanopub/RAjkTUoLt7coa48MQ_sBhAL3y39rviG9BGObzkf5iimy0
> .
@prefix sub: <
http://www.tkuhn.ch/bel2nanopub/RAjkTUoLt7coa48MQ_sBhAL3y39rviG9BGObzkf5iimy0#
> .
@prefix beldoc: <
http://resource.belframework.org/belframework/20131211/knowledge/small_corpus.bel
> .
@prefix rdfs: <
http://www.w3.org/2000/01/rdf-schema#
> .
@prefix rdf: <
http://www.w3.org/1999/02/22-rdf-syntax-ns#
> .
@prefix xsd: <
http://www.w3.org/2001/XMLSchema#
> .
@prefix dce: <
http://purl.org/dc/elements/1.1/
> .
@prefix pav: <
http://purl.org/pav/
> .
@prefix np: <
http://www.nanopub.org/nschema#
> .
@prefix belv: <
http://www.selventa.com/vocabulary/
> .
@prefix prov: <
http://www.w3.org/ns/prov#
> .
@prefix hgnc: <
http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=
> .
@prefix proteinModification: <
http://www.ebi.ac.uk/ontology-lookup/?termId=MOD:00000
> .
@prefix psimod: <
http://www.ebi.ac.uk/ontology-lookup/?termId=MOD:
> .
@prefix go: <
http://amigo.geneontology.org/amigo/term/GO:
> .
@prefix Protein: <
http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI_36080
> .
@prefix geneProductOf: <
http://purl.obolibrary.org/obo/RO_0002204
> .
@prefix hasPart: <
http://purl.obolibrary.org/obo/BFO_0000051
> .
@prefix ProteinComplex: <
http://amigo.geneontology.org/amigo/term/GO:0043234
> .
@prefix hasAgent: <
http://semanticscience.org/resource/SIO_000139
> .
@prefix hasAnnotation: <
http://semanticscience.org/resource/SIO_000255
> .
@prefix species: <
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=
> .
@prefix occursIn: <
http://purl.obolibrary.org/obo/BFO_0000066
> .
@prefix pubmed: <
http://www.ncbi.nlm.nih.gov/pubmed/
> .
@prefix orcid: <
http://orcid.org/
> .
sub:Head
{
this:
np:hasAssertion
sub:assertion
;
np:hasProvenance
sub:provenance
;
np:hasPublicationInfo
sub:pubinfo
;
a
np:Nanopublication
.
}
sub:assertion
{
sub:_1
belv:variantOf
hgnc:4910
;
a
proteinModification:
,
psimod:00696
.
sub:_10
geneProductOf:
hgnc:4910
;
a
Protein:
.
sub:_11
rdf:object
sub:_9
;
rdf:predicate
belv:directlyIncreases
;
rdf:subject
sub:_2
;
a
rdf:Statement
.
sub:_12
occursIn:
species:9606
;
hasAnnotation:
sub:_13
;
rdf:object
sub:_11
;
rdf:predicate
belv:directlyIncreases
;
rdf:subject
sub:_1
;
a
rdf:Statement
.
sub:_13
dc:subject
"TextLocation" ;
rdf:value
"Review" .
sub:_2
hasAgent:
sub:_3
;
a
go:0003824
.
sub:_3
hasPart:
sub:_4
,
sub:_5
,
sub:_6
,
sub:_7
,
sub:_8
;
a
ProteinComplex:
.
sub:_4
geneProductOf:
hgnc:12687
;
a
Protein:
.
sub:_5
geneProductOf:
hgnc:11617
;
a
Protein:
.
sub:_6
geneProductOf:
hgnc:11619
;
a
Protein:
.
sub:_7
geneProductOf:
hgnc:9928
;
a
Protein:
.
sub:_8
geneProductOf:
hgnc:2552
;
a
Protein:
.
sub:_9
belv:degradationOf
sub:_10
.
sub:assertion
rdfs:label
"cat(complex(p(HGNC:VHL),p(HGNC:TCEB1),p(HGNC:TCEB2),p(HGNC:RBX1),p(HGNC:CUL2))) => deg(p(HGNC:HIF1A))" , "p(HGNC:HIF1A,pmod(P,H)) => (cat(complex(p(HGNC:VHL),p(HGNC:TCEB1),p(HGNC:TCEB2),p(HGNC:RBX1),p(HGNC:CUL2))) => deg(p(HGNC:HIF1A)))" .
}
sub:provenance
{
beldoc:
dce:description
"Approximately 2000 hand curated statements drawn from 57 PubMeds." ;
dce:rights
"Copyright (c) 2011-2012, Selventa. All Rights Reserved." ;
dce:title
"BEL Framework Small Corpus Document" ;
dc:license
"Creative Commons Attribution-Non-Commercial-ShareAlike 3.0 Unported License" ;
pav:authoredBy
sub:_15
;
pav:version
"20131211" .
sub:_14
prov:value
"""The stabilization of HIF in response to hypoxia involves the inactivation of prolylhydroxylases
that modify HIF at specific proline residues in an oxygendependent
manner. Proline hydroxylation marks HIF for degradation by the VCB–Cul2 E3 ligase
complex (Figure 3 and Box 1).""" ;
prov:wasQuotedFrom
pubmed:15350900
.
sub:_15
rdfs:comment
"support@belframework.org" ;
rdfs:label
"Selventa" .
sub:assertion
prov:hadPrimarySource
pubmed:15350900
;
prov:wasDerivedFrom
beldoc:
,
sub:_14
.
}
sub:pubinfo
{
this:
dc:created
"2014-07-03T14:31:15.373+02:00"^^
xsd:dateTime
;
pav:createdBy
orcid:0000-0001-6818-334X
,
orcid:0000-0002-1267-0234
.
}